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Getting Started

  • Installation
    • Available packages
    • Before installation
    • Windows 10/11
    • macOS — Intel or Apple Silicon
    • Troubleshooting
    • Uninstalling NIM Studio
      • Windows
      • macOS
    • Beta support
  • Quickstart
    • Beta Release
    • First Launch
    • Module Selection
    • Starting a Workflow
    • Disclaimer

In-App Modules

  • Project Builder
    • Overview
    • Features
    • Project Creation Workflow
    • Generated Structure
    • Customization
    • Relationship to Other Modules
    • Best Practices
    • Benefits
  • Dataset Builder
    • Overview
    • Features
    • Dataset Organization
    • Cohort and Participant Management
    • BIDS Integration
    • Relationship to Other Modules
    • Best Practices
    • Benefits
  • BIDS Transformer
    • Overview
    • Source and Destination
    • Detection Modes
    • Automated Detection
    • Subject Handling
    • Mapping Table
    • Confidence and Review Status
    • Destination Architecture
    • Dry Run
    • Transfer Modes
    • Collision Handling
    • Transfer Manifests
    • Review Outside NIM Studio
    • What the BIDS Transformer Does Not Do
    • Recommended Workflow
    • Beta Safety Notice
  • Metadata Builder
    • Overview
    • Supported Dataset Contexts
    • Dataset Description
      • Required fields
      • Dataset type
      • Recommended and optional fields
      • Derivative provenance fields
    • Participant Management
    • Session Management
    • Scan Inventory
    • Header Extraction
      • NIfTI Metadata
      • DICOM Metadata
    • Existing Sidecars
    • Modality Sidecar Templates
    • Validation Summary
    • Metadata Master Table
    • Available Outputs
    • Recommended Workflow for a New Project
    • Recommended Workflow for an Existing Project
    • What the Metadata Builder Does Not Do
    • Beta Safety Notice
  • Data Management Dashboard
    • Overview
    • Dashboard Scores
    • Dataset Health Assessment
    • Views
    • How to Use the Dashboard
    • Recommended Workflow for a New Project
    • Recommended Workflow for an Existing Project
    • What the Dashboard Does Not Do
  • Duplicate Audit
    • Overview
    • Detection Modes
      • Same Filename
      • Version-Like Files
      • Exact Content Hash
    • Scan Scope
      • Standard Recursive Scan
      • Deep System or Storage Scan
    • Safety Filters
    • Owner Filtering
    • How to Run a Duplicate Audit
    • Reviewing Results
    • Exporting Reports
    • Quarantine Preview
    • Preview-Only Mode
    • Quarantine
    • Recommended Safe Workflow
    • What Duplicate Audit Does Not Guarantee
    • Beta Safety Notice

Framework

  • Software Architecture
    • Architectural Principles
    • System Architecture
      • User Interface
      • Application Layer
      • Core Services
      • Local Data Layer
    • Module-Based Design
    • Benefits
  • Data Hierarchy
    • Project-Centric Design
    • Datasets as Project Components
    • Support for BIDS
    • Flexible by Design
    • Recommended Hierarchy
    • Benefits
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