NIM Studio
Getting Started
Installation
Available packages
Before installation
Windows 10/11
macOS — Intel or Apple Silicon
Troubleshooting
Uninstalling NIM Studio
Windows
macOS
Beta support
Quickstart
Beta Release
First Launch
Module Selection
Starting a Workflow
Disclaimer
In-App Modules
Project Builder
Overview
Features
Project Creation Workflow
Generated Structure
Customization
Relationship to Other Modules
Best Practices
Benefits
Dataset Builder
Overview
Features
Dataset Organization
Cohort and Participant Management
BIDS Integration
Relationship to Other Modules
Best Practices
Benefits
BIDS Transformer
Overview
Source and Destination
Detection Modes
Automated Detection
Subject Handling
Mapping Table
Confidence and Review Status
Destination Architecture
Dry Run
Transfer Modes
Collision Handling
Transfer Manifests
Review Outside NIM Studio
What the BIDS Transformer Does Not Do
Recommended Workflow
Beta Safety Notice
Metadata Builder
Overview
Supported Dataset Contexts
Dataset Description
Required fields
Dataset type
Recommended and optional fields
Derivative provenance fields
Participant Management
Session Management
Scan Inventory
Header Extraction
NIfTI Metadata
DICOM Metadata
Existing Sidecars
Modality Sidecar Templates
Validation Summary
Metadata Master Table
Available Outputs
Recommended Workflow for a New Project
Recommended Workflow for an Existing Project
What the Metadata Builder Does Not Do
Beta Safety Notice
Data Management Dashboard
Overview
Dashboard Scores
Dataset Health Assessment
Views
How to Use the Dashboard
Recommended Workflow for a New Project
Recommended Workflow for an Existing Project
What the Dashboard Does Not Do
Duplicate Audit
Overview
Detection Modes
Same Filename
Version-Like Files
Exact Content Hash
Scan Scope
Standard Recursive Scan
Deep System or Storage Scan
Safety Filters
Owner Filtering
How to Run a Duplicate Audit
Reviewing Results
Exporting Reports
Quarantine Preview
Preview-Only Mode
Quarantine
Recommended Safe Workflow
What Duplicate Audit Does Not Guarantee
Beta Safety Notice
Framework
Software Architecture
Architectural Principles
System Architecture
User Interface
Application Layer
Core Services
Local Data Layer
Module-Based Design
Benefits
Data Hierarchy
Project-Centric Design
Datasets as Project Components
Support for BIDS
Flexible by Design
Recommended Hierarchy
Benefits
NIM Studio
Index
Index